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μGrowthDB
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About μGrowthDB

  • Introduction
  • Installation
  • Deployment
  • Known Issues
  • Release notes

Developer guides

  • ORM Models
  • Controller layer: app.pages, initialization.routes
  • Workers

Reference documentation

  • API documentation
  • Code Documentation
    • db
    • app
      • app.model
        • app.model.lib
          • app.model.lib.chart
          • app.model.lib.compare
          • app.model.lib.conversion
          • app.model.lib.crossref_fetcher
          • app.model.lib.data_spreadsheet
          • app.model.lib.db
          • app.model.lib.dev
          • app.model.lib.errors
          • app.model.lib.excel
          • app.model.lib.help_topics
          • app.model.lib.migrate
          • app.model.lib.model_export
          • app.model.lib.modeling
          • app.model.lib.orcid
          • app.model.lib.r_script
          • app.model.lib.search_queries
          • app.model.lib.study_search
          • app.model.lib.submission_process
          • app.model.lib.techniques
          • app.model.lib.util
        • app.model.orm
          • app.model.orm.bioreplicate
          • app.model.orm.community
          • app.model.orm.community_strain
          • app.model.orm.compartment
          • app.model.orm.custom_model
          • app.model.orm.excel_file
          • app.model.orm.experiment
          • app.model.orm.experiment_compartment
          • app.model.orm.measurement
          • app.model.orm.measurement_context
          • app.model.orm.measurement_technique
          • app.model.orm.metabolite
          • app.model.orm.modeling_result
          • app.model.orm.orm_base
          • app.model.orm.page_error
          • app.model.orm.page_visit
          • app.model.orm.page_visit_counter
          • app.model.orm.perturbation
          • app.model.orm.project
          • app.model.orm.project_user
          • app.model.orm.study
          • app.model.orm.study_metabolite
          • app.model.orm.study_strain
          • app.model.orm.study_technique
          • app.model.orm.study_user
          • app.model.orm.submission
          • app.model.orm.submission_backup
          • app.model.orm.taxon
          • app.model.orm.user
          • app.model.orm.workspace
          • app.model.orm.workspace_entry
      • app.pages
        • app.pages.api
        • app.pages.comparison
        • app.pages.excel_files
        • app.pages.experiments
        • app.pages.help
        • app.pages.metabolites
        • app.pages.modeling
        • app.pages.perturbations
        • app.pages.projects
        • app.pages.search
        • app.pages.static
        • app.pages.strains
        • app.pages.studies
        • app.pages.submissions
        • app.pages.upload
        • app.pages.users
        • app.pages.workspaces
      • app.view
        • app.view.filters
          • app.view.filters.lists
          • app.view.filters.numbers
          • app.view.filters.text
          • app.view.filters.time
          • app.view.filters.urls
        • app.view.forms
          • app.view.forms.base_form
          • app.view.forms.comparative_chart_form
          • app.view.forms.experiment_export_form
          • app.view.forms.search_form
          • app.view.forms.submission_form
          • app.view.forms.upload_step2_form
          • app.view.forms.upload_step3_form
          • app.view.forms.upload_step4_form
          • app.view.forms.upload_step5_form
    • tracking
    • modeling
    • submissions
    • initialization
      • initialization.admin
      • initialization.assets
      • initialization.celery
      • initialization.config
      • initialization.dev
      • initialization.flask_db
      • initialization.global_handlers
      • initialization.maxminddb
      • initialization.plotly
      • initialization.routes
      • initialization.template_filters
      • initialization.timing
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Release notes#

v1.1.0#

WIP

v1.0.0#

https://github.com/msysbio/bacterial_growth/releases/tag/v1.0.0

Rebuild of the microbial growth database. Migrated from a streamlit app to a flask-based website, made lots of backend and UI changes.

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  • Release notes
    • v1.1.0
    • v1.0.0