app.model.orm.perturbation

Classes

Perturbation

The description of a change over time in a particular experiment's environment.

Module Contents

class app.model.orm.perturbation.Perturbation

Bases: app.model.orm.orm_base.OrmBase

The description of a change over time in a particular experiment’s environment.

A perturbation is described by the addition or removal of a Compartment to the experiment or by the change from one Community to another.

This may be changed in the future as we collect more studies with perturbations.

__tablename__ = 'Perturbations'

id: sqlalchemy.orm.Mapped[int]

description: sqlalchemy.orm.Mapped[str]

experimentId: sqlalchemy.orm.Mapped[str]

experiment: sqlalchemy.orm.Mapped[Experiment]

study: sqlalchemy.orm.Mapped[Study]

startTimeInSeconds: sqlalchemy.orm.Mapped[int]

endTimeInSeconds: sqlalchemy.orm.Mapped[int]

removedCompartmentId: sqlalchemy.orm.Mapped[int]

addedCompartmentId: sqlalchemy.orm.Mapped[int]

oldCommunityId: sqlalchemy.orm.Mapped[int]

newCommunityId: sqlalchemy.orm.Mapped[int]

oldCommunity: sqlalchemy.orm.Mapped[Community | None]

newCommunity: sqlalchemy.orm.Mapped[Community | None]

removedCompartment: sqlalchemy.orm.Mapped[Compartment | None]

addedCompartment: sqlalchemy.orm.Mapped[Compartment | None]

startTimeInHours()

endTimeInHours()