Index

_ | A | B | C | D | E | F | G | H | I | J | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y

_

A

add_df() (app.model.lib.chart.Chart method)
add_model_df() (app.model.lib.chart.Chart method)
add_region() (app.model.lib.chart.Chart method)
addedCompartment (app.model.orm.Perturbation attribute)
- (app.model.orm.perturbation.Perturbation attribute)
addedCompartmentId (app.model.orm.Perturbation attribute)
- (app.model.orm.perturbation.Perturbation attribute)
addedCompartmentName (app.view.forms.upload_step5_form.UploadStep5Form.ExperimentForm.PerturbationForm attribute)
advanced_search_index_page() (in module app.pages.search)
aggregate_page_visits() (in module tracking)
ALL_COEFFICIENTS (in module app.model.lib.modeling)
apiEntries (app.model.orm.Workspace property)
- (app.model.orm.workspace.Workspace property)
apiKey (app.model.orm.User attribute)
- (app.model.orm.user.User attribute)
app
- module
app.model
- module
app.model.lib
- module
app.model.lib.chart
- module
app.model.lib.compare
- module
app.model.lib.conversion
- module
app.model.lib.crossref_fetcher
- module
app.model.lib.data_spreadsheet
- module
app.model.lib.db
- module
app.model.lib.dev
- module
app.model.lib.errors
- module
app.model.lib.excel
- module
app.model.lib.help_topics
- module
app.model.lib.migrate
- module
app.model.lib.model_export
- module
app.model.lib.modeling
- module
app.model.lib.orcid
- module
app.model.lib.r_script
- module
app.model.lib.search_queries
- module
app.model.lib.study_search
- module
app.model.lib.submission_process
- module
app.model.lib.techniques
- module
app.model.lib.util
- module
app.model.orm
- module
app.model.orm.bioreplicate
- module
app.model.orm.community
- module
app.model.orm.community_strain
- module
app.model.orm.compartment
- module
app.model.orm.custom_model
- module
app.model.orm.excel_file
- module
app.model.orm.experiment
- module
app.model.orm.experiment_compartment
- module
app.model.orm.measurement
- module
app.model.orm.measurement_context
- module
app.model.orm.measurement_technique
- module
app.model.orm.metabolite
- module
app.model.orm.modeling_result
- module
app.model.orm.orm_base
- module
app.model.orm.page_error
- module
app.model.orm.page_visit
- module
app.model.orm.page_visit_counter
- module
app.model.orm.perturbation
- module
app.model.orm.project
- module
app.model.orm.project_user
- module
app.model.orm.study
- module

app.model.orm.study_metabolite
- module
app.model.orm.study_strain
- module
app.model.orm.study_technique
- module
app.model.orm.study_user
- module
app.model.orm.submission
- module
app.model.orm.submission_backup
- module
app.model.orm.taxon
- module
app.model.orm.user
- module
app.model.orm.workspace
- module
app.model.orm.workspace_entry
- module
app.pages
- module
app.pages.api
- module
app.pages.comparison
- module
app.pages.excel_files
- module
app.pages.experiments
- module
app.pages.help
- module
app.pages.metabolites
- module
app.pages.modeling
- module
app.pages.perturbations
- module
app.pages.projects
- module
app.pages.search
- module
app.pages.static
- module
app.pages.strains
- module
app.pages.studies
- module
app.pages.submissions
- module
app.pages.upload
- module
app.pages.users
- module
app.pages.workspaces
- module
app.view
- module
app.view.filters
- module
app.view.filters.lists
- module
app.view.filters.numbers
- module
app.view.filters.text
- module
app.view.filters.time
- module
app.view.filters.urls
- module
app.view.forms
- module
app.view.forms.base_form
- module
app.view.forms.comparative_chart_form
- module
app.view.forms.experiment_export_form
- module
app.view.forms.search_form
- module
app.view.forms.submission_form
- module
app.view.forms.upload_step2_form
- module
app.view.forms.upload_step3_form
- module
app.view.forms.upload_step4_form
- module
app.view.forms.upload_step5_form
- module
APP_SQLALCHEMY_ENGINE_OPTIONS (in module db)
AppAdminIndexView (class in initialization.admin)
AppDateTimeField (class in initialization.admin)
AppJSONField (class in initialization.admin)
AppModelConverter (class in initialization.admin)
AppView (class in initialization.admin)
authenticate_user() (in module app.model.lib.orcid)
author_cache (app.model.lib.crossref_fetcher.CrossrefFetcher attribute)
author_link_list() (in module app.view.filters.urls)
authorCache (app.model.orm.Study attribute)
- (app.model.orm.study.Study attribute)
authors (app.model.lib.crossref_fetcher.CrossrefFetcher attribute)
- (app.model.orm.Study attribute)
- (app.model.orm.study.Study attribute)
averageMass (app.model.orm.Metabolite attribute)
- (app.model.orm.metabolite.Metabolite attribute)

B

C

D

E

F

G

H

I

J

join_tag() (in module app.view.filters.lists)

L

M

module

N

O

P

Q

query (app.model.lib.study_search.StudySearch attribute)
- (app.model.orm.page_visit.PageVisit attribute)
- (app.model.orm.PageVisit attribute)

query_words (app.model.lib.study_search.StudySearch attribute)

R

S

T

U

V

W

X

xValues (app.model.orm.modeling_result.ModelingResult attribute)
- (app.model.orm.ModelingResult attribute)

Y

yErrors (app.model.orm.modeling_result.ModelingResult attribute)
- (app.model.orm.ModelingResult attribute)

yValues (app.model.orm.modeling_result.ModelingResult attribute)
- (app.model.orm.ModelingResult attribute)